MPs and ministers called for the UK to withdraw from European Court of Human Rights after it intervened to stop an Iraqi citizen being deported - just before the flight was due to take off.
The Boeing 767 - operated by Spanish charter firm Privilege Style - was seen landing at the Ministry of Defence testing site in Wiltshire earlier today.
Judges decided that the plane to the African country could take off as official figures showed 138 people made the perilous journey across the English Channel in three boats.
One of the seven migrants due to be transferred to Rwanda had his removal called off after a move by the European Court of Human Rights, while a second man s move is also thrown into doubt.
Around 80 migrants including young children were brought ashore to Dover Marina in Kent, as official figures show more than 10,000 have now crossed the English Channel so far this year.