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Frontiers | Molecular Phylogenesis and Spatiotemporal Spread of SARS-CoV-2 in Southeast Asia

Frontiers | Molecular Phylogenesis and Spatiotemporal Spread of SARS-CoV-2 in Southeast Asia
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United States , United Kingdom , Indonesia General , Minas Gerais , Forest Hill , Espíto Santo , Northern Samar , Peninsular Malaysia , Malaysia General , New Zealand , Borough Of Bedford , Tinh Bac Giang , Republic Of , New York , East Timor , Van Minh , Han I , Singapore General , Genet Evol , Petaling Tabligh , Abdul Razab , Nat Microbiol , Max Carvalho , Situasi Semasa Jangkitan Penyakit , Kenyataan Akhbar , South East Asia ,

Evolutionary history of H5 highly pathogenic avian influenza viruses (clade 2.3.4.4c) circulating in Taiwan during 2015-2018.


Evolutionary history of H5 highly pathogenic avian influenza viruses (clade 2.3.4.4c) circulating in Taiwan during 2015-2018.
By Chih-Wei Huang,Li-Hsuan Chen,Dong-Hun Lee,Yu-Pin Liu,Wan-Chen Li,Ming-Shiuh Lee,Yen-Ping Chen,Fan Lee,Chwei-Jang Chiou,Yu-Ju Lin
May 3, 2021
The highly pathogenic avian influenza (HPAI) virus A/goose/Guangdong/1/96 H5N1 (Gs/GD) lineage has been transmitted globally and has caused deaths in wild birds, poultry, and humans. Clade 2.3.4.4c, one of the subclades of the Gs/GD lineage, spread through Taiwan in late 2014 and become an endemic virus. We analyzed 239 newly sequenced HPAI clade H5Nx isolates to explore the phylogenetic relationships, divergence times, and evolutionary history of Taiwan HPAI H5Nx viruses from 2015 to 2018. Overall, 15 reassortant genotypes were identified among H5N2, H5N3, and H5N8 viruses. Maximum likelihood and Bayesian phylogenies based on homologous hemagglutinin (HA) and matrix protein (MP) genes suggest that Taiw ....

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